Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015861242.1_cds_XP_016514898.1_27303
CDS Infomation

[gene=LOC107831631] [db_xref=GeneID:107831631] [protein=putative disease resistance protein RGA3] [partial=3'] [protein_id=XP_016514898.1] [location=complement(<41..1562)] [gbkey=CDS]
Sequence

ATGGCGGATCCTGTAATTGGTGCTACTGTTCAAGTTGTGCTTGAGAAATTGCTTTCTCCC
GCTATTGAGGAGGTCAAAAGTTTAAGGAACTACAAGAAAGATCTCAGAATGCTGACACAA
AATGTATCCATGATCCAATTTTTCATTCATGATGCTGAAAGACGACAAGTTGAGGATCAG
GCTGTTGATAAATGGCTGAAGAGGCTTGAGAGAGTTGCTGAAGATGCTGAAAACCTGTTT
GACGAAATGAGATATGAATCTCTCAAAGCTGAAGTGACGAAGATCCGAAGCAACCCTAGG
AAAAAGTTCGGTAATTTCTTTTCTGATATAGCTTTTAAGAGCAAAATGTCTCGAAAAATC
AACAACATCAATGAAGAGTTGAGGGCTATCAATCAGTTAGCCAATACTCTTAGTCTCCAA
CCCCTAAGTGGTCCTTCTCAGCAAATATTACCAATTCGAGAAACGGATTCCATAATAGTT
GCTTCAGATGTTGTTGGTAGAGAGAAGGATGTTGCCGAAATAAAGGATAAGATGTTGAAC
ATGAGAGAGGATATTGTTTTGTGCACCTTTTCCATAGTGGGTATGGGAGGTTTAGGGAAA
ACAACTCTGGCTAAGAGAATTTTCAATGATGAACACATCAAGCAACATTTTGAAAAAAGA
GTTTGGTTGTGTCTACCTGAAATGTTAGAAACTAAGAGATTTCTTGAACTGATCCTCGAA
TCATTGACAGAGAGGAAAACTGAGGTGCAAAGCAGGGATATAATAGTAAAGAAGCTGCAA
GATGAATTGGGAGGGAAGAAGTATTTGCTTGTCCTAGATGATTTGTGGCGTGTCGATCCT
ACATTGTGGCATGAGTTTGCGGACACCTTGAAAGGAATAAACATATCCAGAGGAAACTGC
ATTCTCGTGACTACTCGTAGGGATCAGGTGGCATCCGCAGTAGCAACACATCTTCATATG
TTGGGAAAATTAGCAGAAGATCACTGTTGGTCCATTTTCAAACAAAGAGCATTTGCTGAT
GGGGAGGTACCAGAGGAAGTCGTGAGCTTGGGCAACAGGGTTGTTGAAATGTGTCAAGGT
CTACCGTTGGCAGCAAATGCGTTGGGAGGCCTCTTACGCAATAAGGGAAAACATGAATGG
CAGGAAATTCTTGATGGCAACGCCCTTGTTGCAGGTGAAGGTGATAATGGGGAAAATAGC
TTAAAGAAAATCCTAAAACTGAGCTATATTTATCTACCATCTCCACATCTGAAAAAATGT
TTTGCTTACTTTGCAATGTTTCCAAAAGATTTTGAGTTTGAAAAGGACCAACTAATCCAA
CTCTGGATGGCAGAAGGATTTCTTCGTCCATGTCAAGAGACCTCTGTGATGGAAAACGTT
GGGAACAAAGTTTTTCAACTTTTGTTGCAAAATTCCTTGCTGCAAGATGTTAAGCTAAAT
GAGCACAACGATATAACACACTGTAAGATGCATGATCTTGTGCATGATTTGGCTGGAGAT
GTTTTTGTTGCGGAAGCCAAAT

Peptide Sequence

PEP ID

XP_016514898.1
PEP Infomation

PREDICTED: putative disease resistance protein RGA3, partial [Nicotiana tabacum]
Sequence

MADPVIGATVQVVLEKLLSPAIEEVKSLRNYKKDLRMLTQNVSMIQFFIHDAERRQVEDQ
AVDKWLKRLERVAEDAENLFDEMRYESLKAEVTKIRSNPRKKFGNFFSDIAFKSKMSRKI
NNINEELRAINQLANTLSLQPLSGPSQQILPIRETDSIIVASDVVGREKDVAEIKDKMLN
MREDIVLCTFSIVGMGGLGKTTLAKRIFNDEHIKQHFEKRVWLCLPEMLETKRFLELILE
SLTERKTEVQSRDIIVKKLQDELGGKKYLLVLDDLWRVDPTLWHEFADTLKGINISRGNC
ILVTTRRDQVASAVATHLHMLGKLAEDHCWSIFKQRAFADGEVPEEVVSLGNRVVEMCQG
LPLAANALGGLLRNKGKHEWQEILDGNALVAGEGDNGENSLKKILKLSYIYLPSPHLKKC
FAYFAMFPKDFEFEKDQLIQLWMAEGFLRPCQETSVMENVGNKVFQLLLQNSLLQDVKLN
EHNDITHCKMHDLVHDLAGDVFVAEAK

Transcript Sequence

Gene sequence data has not been registered.